Hybrid optimization of preparative chromatography for a ternary monoclonal antibody mixture

In the purification of monoclonal antibodies, ion-exchange chromatography is typically used among the polishing steps to reduce the amount of product-related impurities such as aggregates and fragments, whilst simultaneously reducing HCP, residual Protein A and potential toxins and viruses. When the product-related impurities are difficult to separate from the products, the optimization of these chromatographic steps can be complex and laborious. In this paper, we optimize the polishing chromatography of a monoclonal antibody from a challenging ternary feed mixture by introducing a hybrid approach of the simplex method and a form of local optimization. To maximize the productivity of this preparative bind-and-elute cation-exchange chromatography, wide ranges of the three critical operational parameters—column loading, the initial salt concentration, and gradient slope—had to be considered. The hybrid optimization approach is shown to be extremely effective in dealing with this complex separation that was subject to multiple constraints based on yield, purity, and product breakthrough. Furthermore, it enabled the generation of a large knowledge space that was subsequently used to study the sensitivity of the objective function. Increased design space understanding was gained through the application of Monte Carlo simulations. Hence, this work proposes a powerful hybrid optimization method, applied to an industrially relevant process development challenge. The properties of this approach and the results and insights gained, make it perfectly suited for the rapid development of biotechnological unit operations during early-stage bioprocess development.     

Epichloë endophyte affects the ability of powdery mildew (Blumeria graminis) to colonise drunken horse grass (Achnatherum inebrians)

The effect of the systemic seed-borne endophyte Epichloë gansuensis on the colonization by Blumeria graminis, the cause of powdery mildew disease, and the growth of the host grass Achnatherum inebrians, was studied under four soil water conditions. Infection incidence, disease lesion parameters, disease index, biomass production and growth parameters of the grass with and without the fungal endophyte were measured and counted after a period of disease. There was a significantly (P < 0.05) higher disease incidence and disease index for endophyte-free (E−) compared to endophyte-infected (E+) plants under different drought stresses. The presence of the endophyte significantly positively affected all of the host grass growth factors. The results of the present study demonstrate that the presence of the Epichloë endophyte reduced the ability of B. graminis to colonise A. inebrians and also conferred enhanced host plant growth at all soil water conditions tested.     

Deciphering preferential interactions within supramolecular protein complexes: the proteasome case

In eukaryotic cells, intracellular protein breakdown is mainly performed by the ubiquitin–proteasome system. Proteasomes are supramolecular protein complexes formed by the association of multiple sub-complexes and interacting proteins. Therefore, they exhibit a very high heterogeneity whose function is still not well understood. Here, using a newly developed method based on the combination of affinity purification and protein correlation profiling associated with high-resolution mass spectrometry, we comprehensively characterized proteasome heterogeneity and identified previously unknown preferential associations within proteasome sub-complexes. In particular, we showed for the first time that the two main proteasome subtypes, standard proteasome and immunoproteasome, interact with a different subset of important regulators. This trend was observed in very diverse human cell types and was confirmed by changing the relative proportions of both 20S proteasome forms using interferon-γ. The new method developed here constitutes an innovative and powerful strategy that could be broadly applied for unraveling the dynamic and heterogeneous nature of other biologically relevant supramolecular protein complexes.     

基因重组TNFα衍生物TRSP10的高效制备及其对DU145细胞抑制作用研究

利用基因工程技术表达能够促使肿瘤细胞DU145凋亡的肿瘤坏死因子α(TNFα)的衍生物TRSP10,并在体外研究其对DU145细胞的抑制效应。以重叠延伸PCR方法合成TRSP10基因序列,并插入高效表达的质粒载体p KYB-MCS的NdeⅠ和SapⅠ酶切位点之间,优化融合蛋白诱导表达的条件,建立了从载体构建到重组菌表达、制备的工艺技术条件。MTT法检测TRSP10对前列腺癌细胞DU145增殖的抑制作用。实验结果表明:重组菌ER2566诱导表达可溶性融合蛋白的最佳条件是诱导剂IPTG浓度为0.8 mmol/L、诱导表达温度37℃、诱导表达时间8h。利用IMPACT系统及HPLC技术纯化制备TRSP10,得到产物纯度达到96%,质谱鉴定确定其分子质量为3.59k Da,与理论值相符;体外细胞学研究结果表明,TRSP10对前列腺癌细胞DU145有明显的抑制作用,在5,10,20,40μmol/L TRSP10及10μmol/L TNFα阳性对照处理后48h抑制率分别达到11.40%,22.97%,33.26%,48.35%及42.50%。     

Extraction and long‐term storage of S‐layer proteins and flagella from Lysinibacillus sphaericus NCTC 9602: Building blocks for nanotechnology

Self‐assembling surface layer (SL) proteins of bacteria have been widely studied, in particular their use as molecularly defined, 2D coatings of technical surfaces. An important prerequisite is the availability of a sufficient amount of protein. However, a detailed and optimized protocol for the complete SL extraction is so far not available. Here, we describe the complete purification and reassembly procedure of an SL protein of Lysinibacillus sphaericus NCTC 9602, starting from the cultivation of cells, the preparation and purification of SL proteins up to the long‐term storage and in vitro self‐assembly of the proteins. All crucial steps of the procedure are assessed by different microscopic techniques, such as light microscopy, atomic force microscopy, and scanning electron microscopy as well as by SDS‐PAGE as a biochemical method. We demonstrate that storage of the protein in the presence of sodium azide or upon lyophilization allows the preservation of the self‐assembly properties for at least 9 years. Additionally, we describe a method allowing the extraction of intact flagella with lengths in the range up to 4 μm. Flagella may have applications in bio‐nanotechnology, for example as templates for metallic nanowires.     

sTRAIL蛋白原核表达载体的构建、表达及抗肿瘤活性研究

目的:从HL-60细胞中获得了sTrail基因片段,优化蛋白表达条件,并研究其抗肿瘤活性。方法:培养HL-60细胞,提取总RNA,通过RT-PCR扩增sTRAIL蛋白基因片段,并将目的基因克隆至原核表达载体p ET28a上,并电击转化E.coli BL21(DE3),IPTG诱导表达,优化蛋白表达条件,Ni-IDA柱纯化重组蛋白,SDS-PAGE蛋白电泳,胶内酶解质谱鉴定。纯化后的重组蛋白作用HUVEC,He La,Hep-3B,HCT-116,MDA-MB-231,H460细胞检测蛋白生物学作用。结果:DNA测序结果证实成功构建了重组质粒p ET28a-sTrail,SDS-PAGE蛋白电泳,胶内酶解质谱检测显示成功表达sTRAIL蛋白,MTT法和流式细胞术结果显示,sTRAIL蛋白对肿瘤细胞包括He La,HCT-116,MDA-MB-231,H460,Hep-3B细胞有良好的生物活性,对正常的HUVEC细胞无毒性。结论:成功构建可以高效表达sTRAIL蛋白的原核表达载体,优化蛋白的表达和纯化后所得sTRAIL蛋白具有良好的抗肿瘤生物活性,为研究和发展利用sTRAIL蛋白作为临床治疗抗肿瘤药物提供了重要基础。     

原核表达的人乙醛脱氢酶2(ALDH2)的活性及稳定性研究

对由原核载体表达的人乙醛脱氢酶2(Aldehyde dehydrogenase 2,简称ALDH2)纯化工艺、酶活性改善、稳定性以及保存条件分别进行了参数的优化,以期为ALDH2商品化剂型开发提供理论依据。通过NAD(P)+酶活测定法,检测不同纯化工艺、金属离子以及不同保存条件对ALDH2的酶活性的影响。通过SDS-PAGE检测ALDH2在模拟胃液和胰液中的稳定性。结果显示,低离子磷酸盐缓冲液透析有利于ALDH2酶活性的恢复,且真空冷冻干燥处理可导致ALDH2酶活性下降。K+、Zn2+、Mg2+、Mn2+、Ca2+均能提高ALDH2酶活性。ALDH2在模拟胃液中稳定性良好,但在模拟胰液中迅速被降解。与此同时,ALDH2酶液在-20℃下能良好地保持其稳定性及酶活,但在4℃和30℃下保存一个月酶活急剧下降。以上结果表明,低离子磷酸盐缓冲液透析法、K+均能提高ALDH2的酶活性,同时该酶可耐受模拟胃液的降解作用,且添加山梨酸钾的ALDH2于-20℃可良好地保持其稳定性及酶活。     

人二倍体甲型肝炎灭活疫苗纯化技术的研究

研究人二倍体细胞甲型肝炎灭活疫苗的纯化方法。 经人二倍体细胞培养的病毒液经澄清、浓缩后制成粗制疫苗,采用Sephacryl S 400、DEAE Sepharose FF、Sephadex G 10等柱层析手段进行纯化。试验证明甲型肝炎病毒粗制疫苗经以上3种层析柱纯化后,抗原组分单一,收率达到85%,杂蛋白去除率达85%以上,蛋白总含量、牛血清残留量各项指标符合中国药典要求,适用于大规模生产。